The actual fee itself does not matter, what matters is if the fee is enough to sustain the current budget and keep adequate reserves for future CAPEX items.

I even left the bigger items there since I heard returned there for a trip back to the apartment to grab items.

I have had to screen copy before sections and show them that tenants were required to report sales and other items.

It really depends how strongly you feel about these items.

My wife and I are currently in the process of purchasing our first property in Baltimore city, MD and were hoping to get some guidance from an experienced investor in the area about some the items that were reported in the inspection.

Even if doing replacement of some big ticket items upfront I would still budget a minimum of 5% for each of them especially on a higher end property such as this that requires good upkeep. 4 of the main benefits of a buy and hold property are below and just because you are not getting all of them in the same property does not mean that particular property is a bad deal, but for a property of this value it is too expensive for the relative returns provided.- Cash Flow- Appreciation- Principle Pay Down- Tax Benefits

Then add 10%-20% contingency reserve to that price for the "unknown items" that are discovered during rehab. 

This just one of many fundamental items you'll need to learn as you go forward.

I am 26, and have been in the military for 7 years now.

Deductions from deposit -- Written itemization -- Time for return.(1)Upon termination of a tenancy, the owner or the owner's agent may apply property or money held as a deposit toward the payment of rent, damages to the premises beyond reasonable wear and tear, other costs and fees provided for in the contract, or cleaning of the unit.