But, the government is not going to reimburse me for damages or non payment of rent that could be the result of abiding by their Fair Housing Act. 

Pay the bill yourself, then reimburse yourself by charging the tenants based on a formula.

If the construction is financed be expected to complete some renovations and request draws for reimbursement. 

Does the property owner get reimbursed this part of the debt once his obligations are met or does the county stay with the funds? 

Assuming I keep the rental I would want a clean delineation between the reimbursement and the rental income.

For example, you would need to submit your driving reports to your S-corp and have the S-corp specifically reimburse you for driving.

Someone needs to build an interface from AppFolio and Buildium into QB.No tracking of which rents were received or not receivedNo tracking of proper security deposit application to expense reimbursement or lost rentNo tracking of loss to leaseNo tracking of vacancy costNo split of repairs for expenditures over and under the $2500 de minimis limitNo tracking of re-positioning costs vs operating expensesExpense misclassifications by the PMKeying summary information may work for a few units but not at a larger scale and not for managing the PM and the business.

The next day one of the tenants emailed and was very nasty saying that “there was a flood in their house and how quickly will it be fixed, how much am I pro rating rent and they expect to be reimbursed for using their electricity to run my machines”.

Although its a nnn lease it may call for you to cover expenses Out of pocket and get reimbursed later by the tenant (ie taxes).

The Zonolite Attic Insulation Trust was set up to reimburse homeowners for the expense of removing this insulation.